Universita di Genova

Publications

TitleYearAuthorVenue
Tracking Interdisciplinary Patterns in Italian Computer Science Networks2026Pretolesi, Daniele; Monteverde, Marco; Lupi, Federico; Vian, Andrea; Barla, AnnalisaComplex Networks & Their Applications XIV. COMPLEX NETWORKS 2025. Studies in Computational Intelligence
Supervised EEG-Based Vigilance State Classification in Preterm Infants2026Burlando, Gaia; Marazzotta, Valentina; Lanino, Sara; Uccella, Sara; Barla, Annalisa; Ramenghi, Luca A.; Nobili, Lino; Arnulfo, Gabriele12th Annual International IEEE/EMBS Conference on Neural Engineering, NER 2025
Artificial intelligence and network science as tools to illustrate academic research evolution in interdisciplinary fields: The case of Italian design2025Pretolesi, Daniele; Stanzani, Ilaria; Ravera, Stefano; Vian, Andrea; Barla, AnnalisaPLOS ONE
Mapping the evolution of design research: a data-driven analysis of interdisciplinary trends and intellectual landscape2025Vian, Andrea; Carella, Gianluca; Pretolesi, Daniele; Barla, Annalisa; Zurlo, FrancescoDRS Biennial Conference Series: DRS2024: Boston, 23–28 June, Boston, USA.
Deep learning-based Alzheimer's disease detection: reproducibility and the effect of modeling choices2024Turrisi, R.; Verri, A.; Barla, A.FRONTIERS IN COMPUTATIONAL NEUROSCIENCE
Geometric Deep Learning Strategies for the Characterization of Academic Collaboration Networks2024Pretolesi, Daniele; Garbarino, Davide; Giampaoli, Daniele; Vian, Andrea; Barla, AnnalisaIEEE TRANSACTIONS ON EMERGING TOPICS IN COMPUTING
AI-driven big web redesign: two case studies in Italian universities2024Vian, Andrea; Pretolesi, Daniele; Rampino, Lucia; Barla, AnnalisaItal-Ia
NLP-based tools for localization of the epileptogenic zone in patients with drug-resistant focal epilepsy2024Mora, Sara; Turrisi, Rosanna; Chiarella, Lorenzo; Consales, Alessandro; Tassi, Laura; Mai, Roberto; Nobili, Lino; Barla, Annalisa; Arnulfo, GabrieleSCIENTIFIC REPORTS
An overview of data integration in neuroscience with focus on Alzheimer’s Disease2023Turrisi, R.; Squillario, M.; Abate, G.; Uberti, D.; Barla, A.IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS
Introducing temporal correlation in rainfall and wind prediction from underwater noise2023Trucco, A.; Barla, A.; Bozzano, R.; Pensieri, S.; Verri, A.; Solarna, D.IEEE JOURNAL OF OCEANIC ENGINEERING
Progettare la città del futuro oltre il visibile: intelligenza artificiale al servizio del cittadino per una esperienza personalizzata del contesto urbano2023Barla, Annalisa; Paniati, Giorgia; Vian, AndreaGUD. GENOVA UNIVERSITÀ DESIGN
Temporal pattern detection in time-varying graphical models2023Tomasi, F.; Tozzo, V.; Barla, A.25th International Conference on Pattern Recognition, ICPR 2020
A computational procedure for functional characterization of potential marker genes from molecular data: Alzheimer's as a case study2022Margherita, Squillario; Barla, AnnalisaBMC MEDICAL GENOMICS
A fully automated deep learning pipeline for micro-CT-imaging-based densitometry of lung fibrosis murine models2022Vincenzi, Elena; Fantazzini, Alice; Basso, Curzio; Barla, Annalisa; Odone, Francesca; Leo, Ludovica; Mecozzi, Laura; Mambrini, Martina; Ferrini, Erica; Sverzellati, Nicola; Stellari, Franco FabioRESPIRATORY RESEARCH
A Supervised Learning Approach for Rainfall Detection From Underwater Noise Analysis2022Trucco, A.; Bozzano, R.; Fava, E.; Pensieri, S.; Verri, A.; Barla, A.IEEE JOURNAL OF OCEANIC ENGINEERING
AI-based component management system for structured content creation, annotation, and publication2022Barla, Annalisa; Cuneo, Marina; Nunzi, Simone Roberto; Paniati, Giorgia; Vian, Andrea5th International Conference on Intelligent Human Systems Integration (IHSI 2022): Integrating People and Intelligent Systems
Alternating proximal regularized dictionary learning.2022Salzo, Saverio; Masecchia, Salvatore; Verri, Alessandro; Barla, AnnalisaNEURAL COMPUTATION
Attributed Graphettes-Based Preterm Infants Motion Analysis2022Garbarino, Davide; Moro, Matteo; Tacchino, Chiara; Moretti, Paolo; Casadio, Maura; Odone, Francesca; Barla, AnnalisaComplex Networks & Their Applications X
Compounding Approaches for Wind Prediction From Underwater Noise by Supervised Learning2022Trucco, Andrea; Barla, Annalisa; Bozzano, Roberto; Fava, Emanuele; Pensieri, Sara; Verri, Alessandro; Solarna, DavidIEEE JOURNAL OF OCEANIC ENGINEERING
Icing: Large-scale inference of immunoglobulin clonotypes2022Tomasi, Federico; Squillario, Margherita; Verri, Alessandro; Bagnara, Davide; Barla, AnnalisaLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Improving disease course detection in multiple sclerosis: an alternative patient-reported outcomes-based strategy2022Brichetto, Giampaolo; Fiorini, Samuele; Tacchino, Andrea; Ponzio, Michela; Barla, Annalisa; Verri, AlessandroMULTIPLE SCLEROSIS
Epigenetic Regulation in Myelodysplastic Syndrome as A Consequence of A MicroRNA Dysregulation2022Avenoso, Daniele; Squillario, Margherita; Barla, Annalisa; Verri, Alessandro; Carminati, Enrico; Nurra, Clara; Todisco, Elisabetta; Gigli, Federica; Bertolini, Francesco; Gregato, Giuliana; Poletti, …
Visual computing methods for assessing the well-being of older people2022Martini, C.; Odone, F.; Noceti, N.; Chessa, M.; Barla, A.; Verri, A.; Cella, A.; Pilotto, A.; Rollandi, G. A.Communications in Computer and Information Science
Where Do We Stand in Regularization for Life Science Studies?2022Tozzo, Veronica; Azencott, Chloé-Agathe; Fiorini, Samuele; Fava, Emanuele; Trucco, Andrea; Barla, AnnalisaJOURNAL OF COMPUTATIONAL BIOLOGY
Missing Values in Multiple Joint Inference of Gaussian Graphical Models2022Tozzo, Veronica; Garbarino, Davide; Barla, Annalisa10th International Conference on Probabilistic Graphical Models
Multi-Output Learning via Spectral Filtering2022Baldassarre, L; Rosasco, Lorenzo; Barla, Annalisa; Verri, AlessandroMACHINE LEARNING
Next Generation Sequencing and Microrna Assay in a Cohort of Patients Affected By Myelodysplastic Syndromes. an Analysis of Clinical and Genotypic Features2022Avenoso, Daniele; Squillario, Margherita; Barla, Annalisa; Verri, Alessandro; Carminati, Enrico; Nurra, Clara; Todisco, Elisabetta; Gigli, Federica; Gregato, Giuliana; Poletti, Claudia; Bertolini, …BLOOD
Multi-task multiple kernel learning reveals relevant frequency bands for critical areas localization in focal epilepsy2022D'Amario, Vanessa; Tomasi, Federico; Tozzo, Veronica; Arnulfo, Gabriele; Barla, Annalisa; Nobili, Lino3rd Machine Learning for Healthcare Conference
Predicting Tennis Match Outcomes with Network Analysis and Machine Learning2021Bayram, Firas; Garbarino, Davide; Barla, AnnalisaSOFSEM 2021: Theory and Practice of Computer Science. SOFSEM 2021
How many mutations does it take to make a uveal melanoma?2021Piaggio, Francesca; Tozzo, Veronica; Bernardi, Cinzia; Croce, Michela; LO SICCO, Claudia; Gangemi, Rosaria; Puzone, Roberto; Viaggi, Silvia; Patrone, Serena; Barla, Annalisa; Coviello, Domenico; …Archives of Clinical and Experimental Ophthalmology
Paths of graduates from the University of Genoa (1990-2016)2021Barla, Annalisa; Fiorini, Samuele; Licaj, Ami; Vacanti, Annapaola; Vian, AndreaIMG2019 -GRÀFICHE/-GRAPHICS
Dynamic simulations of pathways downstream of TGF-beta , Wnt and EGF-family growth factors, in colorectal cancer, including mutations and treatments with onco-protein inhibitors2021Tortolina, L.; Castagnino, N.; De Ambrosi, C.; Barla, A.; Verri, A.; Zoppoli, G.; Bagnasco, L.; Piras, D.; Patrone, F.; Ballestrero, A.New challenges for cancer systems biomedicine
Metodo e sistema di user-centered design per strutturazione ed aggiornamento automatico di contenuti informativi2021Barla, Annalisa; Vian, Andrea; Nunzi, Simone
A Robust Method for Statistical Testing of Empirical Power-Law Distributions2020Garbarino, Davide; Tozzo, Veronica; Vian, Andrea; Barla, AnnalisaAlgorithms and Models for the Web Graph. WAW 2020.
A telescope GWAS analysis strategy, based on SNPs-genes-pathways ensamble and on multivariate algorithms, to characterize late onset Alzheimer’s disease2020Squillario, Margherita; Abate, Giulia; Tomasi, Federico; Tozzo, Veronica; Barla, Annalisa; Uberti, DanielaSCIENTIFIC REPORTS
Data-driven strategies for robust forecast of continuous glucose monitoring time-series2020Fiorini, Samuele; Martini, Chiara; Malpassi, Davide; Cordera, Renzo; Maggi, Davide; Verri, Alessandro; Barla, Annalisa2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)
Gut Microbiota in T1DM-Onset Pediatric Patients: Machine-Learning Algorithms to Classify Microorganisms as Disease Linked2020Biassoni, R.; Di Marco, E.; Squillario, M.; Barla, A.; Piccolo, G.; Ugolotti, E.; Gatti, C.; Minuto, N.; Patti, G.; Maghnie, M.; D'Annunzio, G.THE JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM
Classification of Epileptic Activity Through Temporal and Spatial Characterization of Intracranial Recordings2020D'Amario, V.; Arnulfo, G.; Nobili, L.; Barla, A.Computational Intelligence Methods for Bioinformatics and Biostatistics. CIBB 2018.
Finding structured gene signatures2020Mosci, Sofia; Barla, Annalisa; Verri, Alessandro; Rosasco, Lorenzo2008 IEEE International Conference on Bioinformatics and Biomeidcine Workshops
Transplantation Induces Profound Changes in the Transcriptional Asset of Hematopoietic Stem Cells: Identification of Specific Signatures Using Machine Learning Techniques2020Cilloni, Daniela; Petiti, Jessica; Campia, Valentina; Podestà, Marina; Squillario, Margherita; Montserrat, Nuria; Bertaina, Alice; Sabatini, Federica; Carturan, Sonia; Berger, Massimo; Saglio, …JOURNAL OF CLINICAL MEDICINE
Multi-parameters Model Selection for Network Inference2020Tozzo, V.; Barla, A.Studies in Computational Intelligence
New miRNA signature heralds human NK cell subsets at different maturation steps: involvement of miR- 146a-5p in the regulation of KIR expression2020Pesce, Silvia; Squillario, Margherita; Greppi, Marco; Loiacono, Fabrizio; Moretta, Lorenzo; Moretta, Alessandro; Sivori, Simona; Castagnola, Patrizio; Barla, Annalisa; Candiani, Simona; Marcenaro, …KIR WORKSHOP 2018
The hidden information in patient-reported outcomes and clinician-assessed outcomes: multiple sclerosis as a proof of concept of a machine learning approach2020Brichetto, G.; Monti Bragadin, M.; Fiorini, S.; Battaglia, M. A.; Konrad, G.; Ponzio, M.; Pedulla, L.; Verri, A.; Barla, A.; Tacchino, A.NEUROLOGICAL SCIENCES
Adenine: A HPC-oriented tool for biological data exploration2019Fiorini, Samuele; Tomasi, Federico; Squillario, Margherita; Barla, AnnalisaLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Advances in dynamic modeling of colorectal cancer signaling-network regions, a path toward targeted therapies.2019Tortolina, Lorenzo; Duffy, Dj; Maffei, Massimo; Castagnino, Nicoletta; Carmody, Am; Kolch, W; Kholodenko, Bn; DE AMBROSI, Cristina; Barla, A; Biganzoli, Em; Nencioni, Alessio; Patrone, Franco; …ONCOTARGET
Predicting diabetes second-line therapy initiation in the Australian population via time span-guided neural attention network2019Fiorini, Samuele; Hajati, Farshid; Barla, Annalisa; Girosi, FedericoPLOS ONE
Cancer mutational signatures identification with sparse dictionary learning2019Tozzo, Veronica; Barla, AnnalisaLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Development of a smart post-hospitalization facility for older people by using domotics, robotics, and automated tele-monitoring2019Pilotto, Alberto; Verri, Alessandro; Rollandi, Gian Andrea; Casiddu, Niccolò; Odone, Francesca; Veronese, Nicola; Puntoni, Matteo; Porfirione, Claudia; Barla, Annalisa; Femia, Rosetta; Pericu, Silvia; …GERIATRIC CARE
Different features of tumor-associated NK cells in patients with low-grade or high-grade peritoneal carcinomatosis2019Pesce, S.; Belgrano, V.; Greppi, M.; Carlomagno, S.; Squillario, M.; Barla, A.; Della Chiesa, M.; Di Domenico, S.; Mavilio, D.; Moretta, L.; Candiani, S.; Sivori, S.; De Cian, F.; Marcenaro, E.FRONTIERS IN IMMUNOLOGY
Discrete Changes in Glucose Metabolism Define Aging2019Ravera, Silvia; Podestà, Marina; Sabatini, Federica; Dagnino, Monica; Cilloni, Daniela; Fiorini, Samuele; Barla, Annalisa; Frassoni, FrancescoSCIENTIFIC REPORTS
Secondary Somatic Mutations in G-Protein-Related Pathways and Mutation Signatures in Uveal Melanoma2019Piaggio, Francesca; Tozzo, Veronica; Bernardi, Cinzia; Croce, Michela; Puzone, Roberto; Viaggi, Silvia; Patrone, Serena; Barla, Annalisa; Coviello, Domenico; J. Jager, Martine; van der Velden, Pieter …CANCERS
Temporal prediction of multiple sclerosis evolution from patient-centered outcomes2019Fiorini, Samuele; Verri, Alessandro; Barla, Annalisa; Tacchino, Andrea; Brichetto, GiampaoloProceedings of the 2nd Machine Learning for Healthcare Conference
A visual computing approach for estimating the motility index in the frail elder2018Martini, Chiara; Noceti, Nicoletta; Chessa, Manuela; Barla, Annalisa; Cella, Alberto; Rollandi, GIAN ANDREA; Pilotto, Alberto; Verri, Alessandro; Odone, FrancescaVISIGRAPP 2018 - Proceedings of the 13th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications - 13th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications, VISIGRAPP 2018; Funchal, Madeira; Portugal; 27 January 2018 through 29 January 2018; Code 134881
Data-Driven Continuous Assessment of Frailty in Older People2018Martini, Chiara; Barla, Annalisa; Odone, Francesca; Verri, Alessandro; Cella, Alberto; Rollandi, Gian Andrea; Pilotto, AlbertoFRONTIERS IN DIGITAL HUMANITIES
Hey there's DALILA: a DictionAry LearnIng LibrAry2018Tozzo, Veronica; D'Amario, Vanessa; Barla, Annalisa2017 Imperial College Computing Student Workshop (ICCSW 2017)
Parameter Space Exploration within Dynamic Simulations of Signaling Networks2018C., De Ambrosi; Barla, Annalisa; Tortolina, Lorenzo; Castagnino, Nicoletta; R., Pesenti; Verri, Alessandro; Ballestrero, Alberto; Patrone, Franco; Parodi, SilvioMATHEMATICAL BIOSCIENCES AND ENGINEERING
A Distinct Gene-Expression Profile in Pediatric Ganglioglioma2017Samantha, Mascelli; Alessandro, Raso; Barla, Annalisa; Paolo, Nozza; Roberto, Biassoni; Sara, Pignatelli; Cama, Armando; Verri, Alessandro; Valeria, Capra; Marialuisa, GarrèISPNO 2012
A machine learning pipeline for multiple sclerosis course detection from clinical scales and patient reported outcomes2017Fiorini, Samuele; Verri, Alessandro; Tacchino, Andrea; Ponzio, Michela; Brichetto, Giampaolo; Barla, Annalisa37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2015
A dictionary learning based method for aCGH segmentation2017Masecchia, Salvatore; Salzo, Saverio; Barla, Annalisa; Verri, AlessandroESANN 2013 proceedings, 21st European Symposium on Artificial Neural Networks, Computational Intelligence and Machine Learning
A molecular based subtyping in juvenile idiopathic arthritis (JIA)2017Squillario, Margherita; Malattia, Clara; Basso, Curzio; Barla, Annalisa19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology
Identification of Pathway Signatures in Parkinson’s Disease with Gene Ontology and Sparse Regularization2017Squillario, Margherita; Zycinski, Grzegorz; Barla, Annalisa; Verri, AlessandroComputational Intelligence Methods for Bioinformatics and Biostatistics
Predicting multiple sclerosis disease course with patient centred outcomes (PCOs): a machine learning approach2017Brichetto, Giampaolo; Fiorini, Samuele; Ponzio, M; Barla, Annalisa; Verri, Alessandro; Tacchino, AndreaECTRIMS 2016
Regularized Dictionary Learning2017Barla, Annalisa; Salzo, Saverio; Verri, AlessandroRegularization, Optimization, Kernels, and Support Vector Machines
Enhancing Interpretability of Gene Signatures with Prior Biological Knowledge2017Squillario, Margherita; Barbieri, Matteo; Verri, Alessandro; Barla, AnnalisaMICROARRAYS
PALLADIO: A parallel framework for robust variable selection in high-dimensional data2017Barbieri, Matteo; Fiorini, Samuele; Tomasi, Federico; Barla, Annalisa6th Workshop on Python for High-Performance and Scientific Computing, PyHPC 2016
Molecular fingerprinting reflects different histotypes and brain region in low grade gliomas2017S., Mascelli; Barla, Annalisa; A., Raso; Mosci, Sofia; P., Nozza; R., Biassoni; G., Morana; M., Huber; C., Mircean; D., Fasulo; K., Noy; G., Wittemberg; S., Pignatelli; G., Piatelli; Cama, Armando; M. …BMC CANCER
Genome instability model of metastatic neuroblastoma tumorigenesis by a dictionary learning algorithm2016Masecchia, Salvatore; Coco, Simona; Barla, Annalisa; Verri, Alessandro; Tonini, Gian PaoloBMC MEDICAL GENOMICS
Hausdorff Kernel for 3D Object Acquisition and Detection2016Barla, Annalisa; Odone, Francesca; Verri, Alessandro7th European Conference on Computer Vision, Copenhagen, Denmark, May 28-31, 2002, Proceedings. LNCS 2353
Identification of Multiple Hypoxia Signatures in Neuroblastoma Cell Lines by l1-l2 Regularization and Data Reduction2016Fardin, P; Cornero, A; Barla, Annalisa; Mosci, Sofia; Acquaviva, M; Rosasco, Lorenzo; Gambini, C; Verri, Alessandro; Varesio, L.JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY
Image Kernels2016Barla, Annalisa; Franceschi, E; Odone, Francesca; Verri, AlessandroPattern Recognition with Support Vector Machines, First International Workshop, SVM 2002, Niagara Falls, Canada, August 10, 2002, Proceedings. LNCS 2388
L’Ora del Codice è arrivata a Genova!2016Ancona, Davide; Barla, Annalisa; Catania, Barbara; Delzanno, Giorgio; Guerrini, Giovanna; Mascardi, Viviana; Odone, Francesca; Ribaudo, MarinaMONDO DIGITALE
Building Kernels from Binary Strings for Image Matching2016Odone, Francesca; Barla, Annalisa; Verri, AlessandroIEEE TRANSACTIONS ON IMAGE PROCESSING
Old Fashioned State-of-the-art Image Classification2016Barla, Annalisa; Odone, Francesca; Verri, Alessandro12th International Conference on Image Analysis and Processing, Mantova, Italy, September 17-19, 2003, Proceedings
Quantitative echography in primary uveal melanoma treated by proton beam therapy.2014C., Mosci; F. B., Lanza; Mosci, Sofia; Barla, AnnalisaCANADIAN JOURNAL OF OPHTHALMOLOGY-JOURNAL CANADIEN D OPHTALMOLOGIE
Regenerative Medicine for the Treatment of Teno-desmic Injuries of the Equine. A Series of 150 Horses Treated with Platelet-derived Growth Factors2014M., Scala; S., Lenarduzzi; F., Spagnolo; Trapasso, Maria; C., Ottonello; A., Muraglia; Barla, Annalisa; P., StradaIN VIVO
The Use of Platelet-rich Plasma Gel in Patients with Mixed Tumour Undergoing Superficial Parotidectomy: A Randomized Study2014M., Scala; P., Mereu; Spagnolo, Francesco; Massa, Michela; Barla, Annalisa; Mosci, Sofia; G., Forno; A., Ingenito; P., StradaIN VIVO
A Machine Learning Pipeline for Identification of Discriminant Pathways2013Annalisa Barla; Giuseppe Jurman; Roberto Visintainer; Margherita Squillario; Michele Filosi; Samantha Riccadonna; Cesare FurlanelloSpringer Handbook of Bio-/Neuroinformatics
Knowledge Driven Variable Selection (KDVS) - a new approach to enrichment analysis of gene signatures obtained from high-throughput data2013Zycinski, Grzegorz; Barla, Annalisa; Squillario, Margherita; T., Sanavia; B., Di Camillo; Verri, AlessandroSOURCE CODE FOR BIOLOGY AND MEDICINE
Regenerative surgery for the definitive repair of chronic ulcers: a series of 34 cases treated with platelet-derived growth factors.2013Spagnolo, Francesco; Trapasso, Maria; S., Monteghirfo; Barla, Annalisa; M., ScalaPLASTIC AND RECONSTRUCTIVE SURGERY
Identifying relevant gene functions in Parkinson’s disease: a comparison between analysis pipelines.2013Squillario, Margherita; Zycinski, Grzegorz; Barla, Annalisa; Verri, AlessandroCIBB 2013
Dictionary learning improves subtyping of breast cancer aCGH data2013Masecchia, Salvatore; Barla, Annalisa; Salzo, Saverio; Verri, Alessandro35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)
A Machine Learning Pipeline for Discriminant Pathways Identification2012Annalisa Barla; Giuseppe Jurman; Roberto Visintainer; Margherita Squillario; Michele Filosi; Samantha Riccadonna; Cesare FurlanelloLecture Notes in Computer Science
Comparison of clinical outcomes for patients with large choroidal melanoma after primary treatment with enucleation or proton beam radiotherapy.2012Mosci, C; Lanza, Fb; Barla, Annalisa; Mosci, Sofia; Hérault, J; Anselmi, L; Truini, M.OPHTHALMOLOGICA
Analysis of a Parkinson’s dataset: comparison between KDVS and the Standard pipeline2012Squillario, Margherita; Zycinski, Grzegorz; Masecchia, Salvatore; Verri, Alessandro; Barla, Annalisa11th European Conference on Computational Biology
Inferring oncogenetic tree-models from aCGH of metastatic neuroblastoma2012Masecchia, Salvatore; Barla, Annalisa; Squillario, Margherita; Simona, Coco; Verri, Alessandro; Gian Paolo, Tonini11th European Conference on Computational Biology
Effect of Size and Heterogeneity of Samples on Biomarker Discovery: Synthetic and Real Data Assessment2012Barbara Di Camillo; Tiziana Sanavia; Matteo Martini; Giuseppe Jurman; Francesco Sambo; Annalisa Barla; Margherita Squillario; Cesare Furlanello; GIANNA MARIA TOFFOLO; Claudio CobelliPLoS ONE
Discriminant functional gene groups identification with machine learning and prior knowledge2012Zycinski, Grzegorz; Squillario, Margherita; Barla, Annalisa; T., Sanavia; Verri, Alessandro; B., Di CamilloThe 20 th European Symposium on Artificial Neural Networks, Computational Intelligence and Machine Learning - Proceedings
Gene Ontology based classification improves prediction and gene signature interpretability.2011Tiziana, Sanavia; Aler, Crepaldi; Barla, Annalisa; Barbara Di, CamilloNETTAB 2011
Parameter Space Exploration within Dynamic Simulations of a Signaling Network Downstream of TGF-beta, WNT and EGF-family growth factors, with reference to colorectal cancer2011Barla, Annalisa; DE AMBROSI, Cristina; Tortolina, Lorenzo; Castagnino, Nicoletta; Pesenti, R.; Verri, Alessandro; Ballestrero, Alberto; Patrone, F.; Parodi, S.Workshop on MATHEMATICAL ONCOLOGY: NEW CHALLENGES FOR SYSTEMS BIOMEDICINE
Dynamic Simulations of Pathway Cross-talks Relevant in Colorectal Cancer: A Quantitative Parameter Sensitivity Analysis2011DE AMBROSI, Cristina; Barla, Annalisa; Tortolina, Lorenzo; Castagnino, Nicoletta; R., Pesenti; Verri, Alessandro; Ballestrero, Alberto; Patrone, Franco; Parodi, SilvioNetwork Tools and Applications in Biology (NETTAB) Workshop
Effects of Parameter Space Exploration within Dynamic Simulations of Pathways Downstream of Erbb-family on Breast Cancer2011DE AMBROSI, Cristina; Tortolina, Lorenzo; Castagnino, Nicoletta; R., Pesenti; Barla, Annalisa; Verri, Alessandro; Ballestrero, Alberto; Parodi, Silvio8th Annual Meeting of the Bioinformatics Italian Society
Uncovering Candidate Biomarkers for Alzheimer's and Parkison's Diseases with Regularization Methods and Prior Knowledge2011Squillario, Margherita; Masecchia, Salvatore; Zycinski, Grzegorz; Barla, AnnalisaProceedings of AD/PD 2011
SVS: Data and knowledge integration in computational biology2011Zycinski, Grzegorz; Barla, Annalisa; Verri, Alessandro33rd Annual International Conference of the IEEE Engineering-in-Medicine-and-Biology-Society (EMBS)
A Biology-driven Approach Identifies the Hypoxia Gene Signature as a Predictor of the Outcome of Neuroblastoma Patients2010Fardin, P; Barla, Annalisa; Mosci, Sofia; Rosasco, Lorenzo; Verri, Alessandro; Caron, H; Molenaar, J; Ora, I; Eva, A; Puppo, M; Varesio, L.MOLECULAR CANCER
Functional characterization of Parkinson by high-throughput data analysis with l1l2 regularization2010Squillario, Margherita; Masecchia, Salvatore; Barla, Annalisa9th European Conference on Computational Biology
Vector Field Learning via Spectral Filtering2010Baldassarre, L; Rosasco, Lorenzo; Barla, Annalisa; Verri, AlessandroEuropean Conference on Machine Learning and Knowledge Discovery in Databases, Barcelona, Spain, September 20-24, 2010, Proceedings. LNCS 6321
Combining l1-l2 regularization with biological prior for multi-level hypoxia signature in Neuroblastoma2010Barla, Annalisa; Mosci, Sofia; Rosasco, Lorenzo; Verri, Alessandro; P., Fardin; A., Cornero; M., Acquaviva; L., VaresioWorkshop on Machine Learning in Systems Biology
Specific gene expression signatures of low-grade gliomas (LGG)2010Mascelli, S.; Raso, A.; Nozza, P.; Pignatelli, S.; Biassoni, R.; Barla, Annalisa; Mosci, Sofia; Rosasco, Lorenzo; Verri, Alessandro; Wittenberg, G.; Noy, K.; Mircean, C.; Fasulo, D.; Morana, G.; …ISPNO 2010
L1-L2 regularization framework for Alzheimer’s molecular characterization2010Barla, Annalisa; Masecchia, Salvatore; Squillario, Margherita18th Annual International Conference on Intelligent Systems for Molecular Biology
Learning how to grasp objects2010Barla, Annalisa; L., Baldassarre; Noceti, Nicoletta; Odone, FrancescaProc. of ESANN, European Symposium on Artificial Neural Net
Proton beam radiotherapy of uveal melanoma: Italian patients treated in Nice, France.2009C., Mosci; Mosci, Sofia; Barla, Annalisa; Squarcia, Sandro; P., Chauvel; N., IborraEUROPEAN JOURNAL OF OPHTHALMOLOGY
Deployment of a Regularized Feature Selection Framework on an Overlay Desktop Grid2009Barla, Annalisa; Ferrante, Marco2009 International Workshop on High Performance Computational Systems Biology
Towards a theoretical framework for learning multi-modal patterns for embodied agents2009Noceti, Nicoletta; B., Caputo; C., Castellini; L., Baldassarre; Barla, Annalisa; Rosasco, Lorenzo; Odone, Francesca; Sandini, GiulioImage Analysis and Processing - ICIAP 2009, 15th International Conference
The l1-l2 Regularization Framework Unmasks the Hypoxia Signature Hidden in the Transcriptome of a Set of Heterogenous Neuroblastoma Cell Lines2009Fardin, P; Barla, Annalisa; Mosci, Sofia; Rosasco, Lorenzo; Verri, Alessandro; Varesio, L.BMC GENOMICS
A Method for Robust Variable Selection with Significance Assessment2008Barla, Annalisa; Mosci, Sofia; Rosasco, Lorenzo; Verri, Alessandro16th European Symposium on Artificial Neural Networks, Bruges, Belgium, April 23-25, 2008, Proceedings
Vector valued regression for iron overload estimation2008 19th International Conference on Pattern Recognition2008Luca, Baldassarre; Barla, Annalisa; Gianesin, Barbara; Marinelli, Mauro2008 19th International Conference on Pattern Recognition
A Grid Environment for High-Throughput Proteomics2007Mario Cannataro; Annalisa Barla; Roberto Flor; Giuseppe Jurman; Stefano Merler; Silvano Paoli; Giuseppe Tradigo; Pierangelo Veltri; Cesare FurlanelloIEEE Transactions on Nanobioscience
Algebraic stability indicators for ranked lists in molecular profiling2007Giuseppe Jurman; Stefano Merler; Annalisa Barla; Silvano Paoli; Antonio Galea; Cesare FurlanelloBioinformatics
Classificazione predittiva per il profiling proteomico2007G., Jurman; Barla, Annalisa; S., Riccadonna; C., FurlanelloGenomica e Proteomica Computazionale
Machine learning methods for predictive proteomics2007Annalisa Barla; Giuseppe Jurman; Samantha Riccadonna; Stefano Merler; Marco Chierici; Cesare FurlanelloBriefings in Bioinformatics
Semisupervised multiband segmentation for predictive proteomic analysis.2007Barla, Annalisa; B., Irler; S., Paoli; G., Jurman; S., Merler; C., FurlanelloCongress of European Proteomics Association
Proteome Profiling without Selection Bias2006Annalisa Barla; B. Irler; Stefano Merler; Giuseppe Jurman; Silvano Paoli; Cesare Furlanello19th IEEE Symposium on Computer-Based Medical Systems (CBMS'06)
Web Tools to Support Image Classification2005Odone, Francesca; Barla, Annalisa; Franceschi, E; Verri, AlessandroInternet Imaging VI, San Diego CA, USA, January 17, 2005, Proceedings of SPIE Volume 5670
Histogram Intersection Kernel for Image Classification2003Barla, Annalisa; Odone, Francesca; Verri, AlessandroInternational Conference on Image Processing, Barcelona, Catalonia, Spain, September 14-18, 2003, Proceedings
Kernel-based 3D Object Representation,2002Barla, Annalisa; Odone, FrancescaArtificial Neural Networks - ICANN 2002, International Conference